Mastering Scientific Computing with R - download pdf or read online

By Paul Gerrard, Radia M. Johnson

ISBN-10: 1783555254

ISBN-13: 9781783555253

Employ expert quantitative easy methods to resolution medical questions with a robust open resource facts research environment

About This Book

  • Perform publication-quality technological know-how utilizing R
  • Use a few of R's strongest and least identified positive aspects to resolve advanced medical computing problems
  • Learn the way to create visible illustrations of clinical results

Who This publication Is For

If you need to how to quantitatively solution clinical questions for sensible reasons utilizing the strong R language and the open resource R software surroundings, this booklet is perfect for you. it truly is ideal for scientists who comprehend medical recommendations, comprehend a bit R, and need in order to commence making use of R in an effort to resolution empirical medical questions. a few R publicity is beneficial, yet now not compulsory.

In Detail

With this ebook, you'll research not only approximately R, yet the best way to use R to reply to conceptual, clinical, and experimental questions.

Beginning with an outline of basic R options, you are going to learn the way R can be utilized to accomplish the main typically wanted medical info research initiatives: checking out for statistically major alterations among teams and version relationships in facts. you are going to delve into linear algebra and matrix operations with an emphasis no longer at the R syntax, yet on how those operations can be utilized to handle universal computational or analytical wishes. This ebook additionally covers the applying of matrix operations for the aim of discovering constitution in high-dimensional information utilizing the significant part, exploratory issue, and confirmatory issue research as well as structural equation modeling. additionally, you will grasp equipment for simulation and find out about a sophisticated analytical method.

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Additional resources for Mastering Scientific Computing with R

Sample text

Width ~ Species, data=iris, ylab="petal width", cex. 5) The result is shown in the following plot: [ 42 ] Chapter 1 Flow control In this section, we will review flow-control statements that you can use when programming with R to simplify repetitive tasks and make your code more legible. Programming with R involves putting together instructions that the computer will execute to fulfill a certain task. As you have noticed this far, R commands consist mainly of expressions or functions to be evaluated.

The class() function tells us the class (type) of the object as follows: > class(simple_list) [1] "list" The dim() function returns the dimension of higher-order objects such as matrices, data frames, and multidimensional arrays. The names() function allows you to give names to each element of your vector as follows: > y <- c(first =1, second =2, third=4, fourth=4) > y first second third fourth 1 2 4 4 [ 19 ] Programming with R You can use the names() attribute to add the names of each element to your vector as follows: > > > > element_names <- c("first", "second", "third", "fourth") y <- c(1, 2, 4, 4) names(y) <- element_names y first second third fourth 1 2 4 4 You can also modify the names of vector elements using the setNames() function as follows: > setNames(y, c("alpha", "beta", "omega", "psi")) alpha beta, omega psi 1 2 4 4 If you do not provide names for some of your vector elements, the names() function will return empty strings, , for the missing ones as follows: > y <- setNames(y, c("alpha", "beta", "psi")) > names(y) [1] "alpha" "beta" "psi" NA However, this does not mean that all vectors require names.

However, unlike the save() function, you can only save one object at a time with the saveRDS() function. txt file, you will notice that only the result of the sum of x+y is saved to the file and not the commands or comments you entered. txt file: [1] 5 7 9 As you can see, comments and standard input aren't included in the output. Only the output is printed to the file specified in the sink() function. Basic plots and the ggplot2 package This section will review how to make basic plots using the built-in R functions and the ggplot2 package to plot graphics.

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Mastering Scientific Computing with R by Paul Gerrard, Radia M. Johnson


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